Post-installation testing.īefore proceeding, make sure your ~/.profile contains the lines described above (see "Your complete ~/.profile should now look like this:"). This command outputs a message to the terminal that tells where the dmg was created. If you are developer and want to prepare a packaged version of NEURON, build a dmg. Once stripped, however, NEURON has to be rebuilt in order to generate a version that is not stripped. You can prevent stripping by defining a strip script that is null before executing make. The executables to be stripped can be found by examining nrn/src/mac/after-install.sh for the lines that contain strip. strips the executables, making them smaller but more difficult to use with gdb.Make after_install does the following things: Your complete ~/.profile should now look like this: Create a nrnenv in $HOME/neuron/ with these contents:Įxport PATH=$IV/$CPU/bin:$N/$CPU/bin:$PATHĪnd add the following lines to your ~/.profile nrn/configure -prefix=$IDIR/nrn -with-iv=$IDIR/iv -with-nrnpython=dynamic -with-paranrn=dynamicĮ. Get the source code for InterViews and NEURON Set up folders for the NEURON application so that the graphical icons will work and Python will work when desired.ī. Expand the tar.gz file, then install openmpi.Īfter you get to this point, the rest is pretty easy.Ī. If you plan to run parallel simulations under MPI on your Mac, you'll need to download and install the tar.gz file for the latest stable release of Open MPI from. To verify that this worked, execute this command That will enable single click action so you can click on a button in a window without first having to click on the window to make it active. Make sure the "reopen windows when you log back in" box is checked, so your terminal and these instructions will reappear when you log back in.ĭefaults write 11 wm_ffm -bool true The installer will prompt you to log off, then back on, to make XQuartz your default X11 server. XQuartzĭownload and install the most recent XQuartz dmg from. If ~/.profile does not already exist, create one and put those lines in it. Repeat step 3 for automake, then for libtool.ĥ. From that same terminal, expand autoconf, then cd to the root of autoconf's source code tree and install it.Ĥ. Execute these commands in a terminal windowģ. Download the most recent source code for autoconf, automake, and libtool from. When prompted, click "install" and then "agree" to the license.ĭownload and install Git from. The most convenient way to put GCC on your Mac is to execute the following in a terminal window: To install NEURON from source code, you will need the following: It may be best to restart your machine.IV. Once installation is successful, close the installer. Hit "Ok" to make XQuartz your default X11 server.Ħ. You will then be prompted to allow the installer to access particular parts of your system.Īccept these. You will be prompted to provide authorization to install - enter your passwordĥ. At the 'Installation Type' step, select "Install" Run through the XQuartz installer steps, accept the T&A. Right-click on the XQuartz.pkg file and select "Open With" to select the default installer for package filesĤ. This will unpack to provide you access to the XQuartz.pkgģ. Once the product has downloaded, right-click on the XQuartz-2.7.11.dmg file and select "Open With" to select the default installer for Disk Images. On Catalina, you may have downloads restricted and will possibly need to allow downloads:Ģ. Go to XQuartz and install XQuartz 2.7.11. When Catalina has been upgraded, the Desktop will include a folder containing “Relocated Items.” If you had XQuartz previously installed before upgrading to Catalina, it may have been quarantined within the "Relocated Items" folder:ġ. Reinstalling XQuartz 2.7.11 if Relocation causes issues: In our testing, we did not find the relocation of these files to cause issues, however, if you do experience issues with your X11 viewer, you may need to reinstall XQuartz. When Catalina has been upgraded, the Desktop will include a folder containing “Relocated Items.” If you had XQuartz previously installed before upgrading to Catalina, it may have been quarantined within the "Relocated Items" folder.
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |